| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman and Nicobar Islands | Sea/Bay/Gulf | native | 118627 |
| Arabian Sea | Sea/Bay/Gulf | native | 247 |
| Bay of Bengal | Sea/Bay/Gulf | native | 118627 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| Davao Gulf | Sea/Bay/Gulf | native | 47737 |
| East China Sea | Sea/Bay/Gulf | native | 11230 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Aden | Sea/Bay/Gulf | native | 247 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Gulf of California | Sea/Bay/Gulf | native | 43278 |
| Gulf of Oman | Sea/Bay/Gulf | native | 47613 |
| Indian Ocean | Sea/Bay/Gulf | native | 6871 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 247 |
| Kuroshio Current | Sea/Bay/Gulf | native | 559 |
| North Australian Shelf | Sea/Bay/Gulf | native | 6871 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 6871 |
| Pacific Central-American Coastal | Sea/Bay/Gulf | native | 247 |
| Pacific Ocean | Sea/Bay/Gulf | native | 6871 |
| Persian Gulf | Sea/Bay/Gulf | native | 247 |
| Peru-Galapagos Waters | Sea/Bay/Gulf | native | 247 |
| Polynesian Waters | Sea/Bay/Gulf | native | 247 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 45419 |
| Tahiti I. | Sea/Bay/Gulf | native | 247 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| Visayan Sea | Sea/Bay/Gulf | native | 47737 |
| Yellow Sea | Sea/Bay/Gulf | native | 247 |