| Species | Name | Family | Habitat | Length (cm) | Trophic Level | Status |
|---|---|---|---|---|---|---|
| Channa argus | Snakehead | Channidae | benthopelagic | 100.0 TL | 4.4 | introduced |
| Cottus nasalis | Tubenose sculpin | Cottidae | demersal | 6.9 TL | 3.2 | native |
| Cottus spinulosus | Turkestan sculpin | Cottidae | demersal | 10.3 TL | 3.2 | native |
| Luciobarbus capito | Bulatmai barbel | Cyprinidae | benthopelagic | 105.0 TL | 2.8 | native |
| Phoxinus phoxinus | Eurasian minnow | Leuciscidae | demersal | 14.0 TL | 3.2 | native |
| Pseudoscaphirhynchus fedtschenkoi | Syr Darya sturgeon | Acipenseridae | demersal | 65.0 TL | 3.3 | endemic |
| Triplophysa kafirnigani | Nemacheilidae | demersal | 3.1 | native |