| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 189 |
| Arabian Sea | Sea/Bay/Gulf | native | 189 |
| Australian | Zoogeographic realm | native | 189 |
| Bay of Bengal | Sea/Bay/Gulf | native | 1479 |
| Chiku River | River (basin) | native | 36073 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Erhjen River | River (basin) | native | 36073 |
| Ethiopian | Zoogeographic realm | native | 189 |
| Gulf of Oman | Sea/Bay/Gulf | native | 189 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 189 |
| Indian Ocean | Sea/Bay/Gulf | native | 189 |
| Indonesian Sea | Sea/Bay/Gulf | native | 189 |
| Kaoping River | River (basin) | native | 36073 |
| Malacca Strait | Sea/Bay/Gulf | native | 121464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 7300 |
| Oriental | Zoogeographic realm | native | 189 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7300 |
| Palearctic | Zoogeographic realm | native | 189 |
| Persian Gulf | Sea/Bay/Gulf | native | 51791 |
| Ruerhmen River | River (basin) | native | 36073 |
| San Miguel Bay | Sea/Bay/Gulf | native | 5541 |
| Shihtsao River | River (basin) | native | 36073 |
| Shiliao River | River (basin) | native | 36073 |
| Sikao Creek | River (basin) | native | 52823 |
| Sorsogon Bay | Sea/Bay/Gulf | native | 47531 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 125407 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 393 |
| Tsengwen River | River (basin) | native | 36073 |
| Yellow Sea | Sea/Bay/Gulf | native | 189 |