| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 5213 |
| Atlantic Ocean | Sea/Bay/Gulf | native | 2334 |
| Canary Current | Sea/Bay/Gulf | native | 3592 |
| Cape Verde | Sea/Bay/Gulf | native | 94080 |
| Caribbean Sea | Sea/Bay/Gulf | native | 48497 |
| Chesapeake Bay | Sea/Bay/Gulf | Native | 93252 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 1602 |
| Davao Gulf | Sea/Bay/Gulf | native | 43437 |
| Discovery Bay | Sea/Bay/Gulf | native | 35141 |
| East Brazil Shelf | Sea/Bay/Gulf | native | 33407 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 37816 |
| Gulf of Aden | Sea/Bay/Gulf | native | 5450 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Gulf of Maine | Sea/Bay/Gulf | native | 86779 |
| Gulf of Mexico | Sea/Bay/Gulf | native | 26340 |
| Gulf of Oman | Sea/Bay/Gulf | native | 11441 |
| Indian Ocean | Sea/Bay/Gulf | native | 2334 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 583 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | native | 1602 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Lutao Island | Sea/Bay/Gulf | native | 11104 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Narra | Sea/Bay/Gulf | native | 114805 |
| North Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| North Brazil Shelf | Sea/Bay/Gulf | native | 33407 |
| Pacific Central-American Coastal | Sea/Bay/Gulf | native | 9318 |
| Pacific Ocean | Sea/Bay/Gulf | native | 592 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Peru-Galapagos Waters | Sea/Bay/Gulf | native | 5227 |
| Polynesian Waters | Sea/Bay/Gulf | native | 1602 |
| Rapa-Pitcairn | Sea/Bay/Gulf | native | 121505 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45674 |
| Scotian Shelf | Sea/Bay/Gulf | native | 7251 |
| Shiliao River | River (basin) | native | 36073 |
| Sogod Bay | Sea/Bay/Gulf | native | 46392 |
| South Brazil Shelf | Sea/Bay/Gulf | native | 33407 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| South West Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Southeast U.S. Continental Shelf | Sea/Bay/Gulf | native | 48497 |
| Southern China | Sea/Bay/Gulf | native | 119494 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 42484 |
| Tahiti I. | Sea/Bay/Gulf | native | 89972 |
| Tayabas Bay | Sea/Bay/Gulf | native | 82367 |
| Tsengwen River | River (basin) | native | 36073 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 57038 |
| Twin Banks | Seamount | stray | 35722 |
| Verde Island Passage | Sea/Bay/Gulf | native | 82367 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 1602 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |