| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 90102 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Indian Ocean | Sea/Bay/Gulf | native | 7247 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7247 |
| North Australian Shelf | Sea/Bay/Gulf | native | 7247 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 7247 |
| Pacific Ocean | Sea/Bay/Gulf | native | 7247 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 94637 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 7247 |
| Tawi tawi Bay | Sea/Bay/Gulf | native | 59110 |
| West Central Australian Shelf | Sea/Bay/Gulf | native | 115274 |