n = 21
| Scientific Name | Author | Valid Name | Family | English Name |
|---|---|---|---|---|
| Tomiyamichthys alleni | Iwata, Ohnishi & Hirata, 2000 | Tomiyamichthys alleni | Gobiidae | Allen's shrimpgoby |
| Tomiyamichthys dorsostigma | Bogorodsky, Kovačić & Randall, 2011 | Tomiyamichthys dorsostigma | Gobiidae | |
| Tomiyamichthys emilyae | Allen, Erdmann & Utaman, 2019 | Tomiyamichthys emilyae | Gobiidae | Emily’s shrimpgoby |
| Tomiyamichthys eyreae | Allen, Erdmann & Mongdong, 2020 | Tomiyamichthys eyreae | Gobiidae | Janet's shrimpgoby |
| Tomiyamichthys fourmanoiri | (Smith, 1956) | Tomiyamichthys fourmanoiri | Gobiidae | |
| Tomiyamichthys gomezi | Allen & Erdmann, 2012 | Tomiyamichthys gomezi | Gobiidae | Gomez' shrimpgoby |
| Tomiyamichthys lanceolatus | (Yanagisawa, 1978) | Tomiyamichthys lanceolatus | Gobiidae | Lanceolate shrimpgoby |
| Tomiyamichthys latruncularia | (Klausewitz, 1974) | Tomiyamichthys latruncularius | Gobiidae | Fan shrimp-goby |
| Tomiyamichthys latruncularius | (Klausewitz, 1974) | Tomiyamichthys latruncularius | Gobiidae | Fan shrimp-goby |
| Tomiyamichthys levisquama | Hoese, Shibukawa & Johnson, 2016 | Tomiyamichthys levisquama | Gobiidae | |
| Tomiyamichthys nudus | Allen & Erdmann, 2012 | Tomiyamichthys nudus | Gobiidae | Scaleless shrimpgoby |
| Tomiyamichthys oni | (Tomiyama, 1936) | Tomiyamichthys oni | Gobiidae | Monster shrimpgoby |
| Tomiyamichthys praealta | (Lachner & McKinney, 1981) | Tomiyamichthys praealta | Gobiidae | Tall-fin shrimp-goby |
| Tomiyamichthys praealtus | (Lachner & McKinney, 1981) | Tomiyamichthys praealta | Gobiidae | Tall-fin shrimp-goby |
| Tomiyamichthys randalli | Goren & Karplus, 1983 | Psilogobius randalli | Gobiidae | |
| Tomiyamichthys reticulatus | Greenfield, 2017 | Tomiyamichthys reticulatus | Gobiidae | Reticulated shrimpgoby |
| Tomiyamichthys russus | (Cantor, 1849) | Tomiyamichthys russus | Gobiidae | Ocellated shrimpgoby |
| Tomiyamichthys smithi | (Chen & Fang, 2003) | Tomiyamichthys smithi | Gobiidae | Smith's shrimpgoby |
| Tomiyamichthys stuarti | Allen, Erdmann & Brooks, 2018 | Tomiyamichthys stuarti | Gobiidae | Nuakata shrimpgoby |
| Tomiyamichthys tanyspilus | Randall & Chen, 2007 | Tomiyamichthys tanyspilus | Gobiidae | Longspot shrimpgoby |
| Tomiyamichthys zonatus | Allen, 2015 | Tomiyamichthys zonatus | Gobiidae | Brownband shrimpgoby |